Disease: Liver carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs750814369
FAM89B ; ZNRD2-AS1 ; ZNRD2
1.000 0.080 11 65570617 missense variant C/A;T snv 2.8E-05 3
rs750521832
MMP8
0.732 0.200 11 102718452 missense variant A/G snv 4.0E-06 14
rs745564626
XRCC3 ; KLC1
0.752 0.280 14 103699003 missense variant C/G;T snv 4.3E-05 14
rs7421861
LOC105373977 ; PDCD1
0.790 0.200 2 241853198 intron variant A/G;T snv 9
rs738409
PNPLA3
0.557 0.720 22 43928847 missense variant C/G snv 0.28 0.22 88
rs735482
CD3EAP ; ERCC1
0.742 0.160 19 45408744 missense variant A/C snv 0.21 0.20 16
rs712
KRAS
0.677 0.360 12 25209618 3 prime UTR variant A/C snv 0.46 24
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 64
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv 67
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs696
NFKBIA
0.708 0.520 14 35401887 3 prime UTR variant C/T snv 0.45 22
rs6940552
ZNRD1ASP
1.000 0.080 6 30044563 intron variant G/A snv 0.12 3
rs689466
PACERR ; PTGS2
0.637 0.640 1 186681619 upstream gene variant T/C snv 0.17 33
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs6682925
C1orf141 ; IL23R
0.776 0.160 1 67165579 intron variant C/T snv 0.47 11
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 157
rs6553010
LOC105377596 ; MTNR1A
0.851 0.240 4 186535189 intron variant G/A snv 0.23 7
rs6505162
NSRP1 ; MIR3184 ; MIR423
0.695 0.320 17 30117165 5 prime UTR variant A/C;T snv 0.50; 3.1E-05 25
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 272
rs619586
MALAT1
0.724 0.360 11 65498698 non coding transcript exon variant A/G snv 5.9E-02 3.3E-02 15
rs587778720
TP53
0.667 0.360 17 7674893 missense variant C/A;G;T snv 4.0E-06 31
rs5751129
XRCC6 ; DESI1
0.752 0.320 22 41619761 intron variant C/T snv 0.69 14
rs5743708
TLR2
0.525 0.800 4 153705165 missense variant G/A snv 1.7E-02 1.8E-02 98
rs568408
IL12A ; IL12A-AS1
0.649 0.600 3 159995680 3 prime UTR variant G/A snv 0.16 29
rs55832599
TP53
0.716 0.360 17 7673821 missense variant G/A snv 18